Helicobacter pylori (Hp) is associated in human gastric diseases. It touches more than 50% of the world's population. Clinically, amoxicillin is one of the antibiotics used to treat the pathogenic agent. It inhibits bacterial wall synthesis, by blocking the transpeptidase domain of penicillin binding protein 1A (PBP1A). Mutations in this domain are responsible for antimicrobial resistance (AMR). The transglycosylase domain is necessary to activate the transpeptidase. But its part in the resistance remains little documented. The objective of this study was to analyze the protein sequence of this domain in samples of Malian patients. Therefore, the PCR product was sequenced from five Hp positive samples. After alignment with the Helicobacter pylori 26695 sequence (reference), several amino acid substitutions were identified: T30N / F67S / I79V / I101V / F125L / I148L for sample 1 (PBP1A-ML1); G44S / I101V / F125L for PBP1A-ML2 and PBP1A-ML5 and A36V / F125L / I148L for PBP1A-ML3 and PBP1A-ML4. The last two groups of mutations were also observed in Hp PBP1A from other continents. Their existence shows the distribution of two or more Hp strains in Mali and worldwide. Although their direct implications for AMR have not been demonstrated, but their presence is supposed to modify the affinity of amoxicillin for its target. Considering the importance of transglycosylase in the activation of the transpeptidase domain, substitutions would allow Hp to adapt to a change in its environment. Additional research is needed to identify the role of observed substitutions.
Published in | American Journal of Biomedical and Life Sciences (Volume 10, Issue 6) |
DOI | 10.11648/j.ajbls.20221006.11 |
Page(s) | 155-161 |
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This is an Open Access article, distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution and reproduction in any medium or format, provided the original work is properly cited. |
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Copyright © The Author(s), 2022. Published by Science Publishing Group |
Helicobacter pylori, Amoxicillin, PBP1A, Transglycosylase Domain, Diversity, Mali
[1] | Robin Warren J, Marshall B. Unidentified curved bacilli on gastric epithelium in active chronic gastritis. The Lancet. June 1983; 321 (8336): 1273 5. |
[2] | Itoh T, Yanagawa Y, Shingaki M, Takahashi M, Kai A, Ohashi M, et al. Isolation of Campylobacter pyloridis from human gastric mucosa and characterization of the isolates. Microbiology and Immunology. July 1987; 31 (7): 603 14. |
[3] | Pop R, Tăbăran AF, Ungur AP, Negoescu A, Cătoi C. Helicobacter pylori-induced gastric infections: from pathogenesis to novel therapeutic approaches using silver nanoparticles. Pharmaceutics. 14 juill 2022; 14 (7): 1463. |
[4] | Linz B, Balloux F, Moodley Y, Manica A, Liu H, Roumagnac P, et al. An african origin for the intimate association between humans and Helicobacter pylori. Nature. Feb 2007; 445 (7130): 915-8. |
[5] | Moodley Y, Linz B, Bond RP, Nieuwoudt M, Soodyall H, Schlebusch CM, et al. Age of the association between Helicobacter pylori and man. Ochman H, éditeur. PLoS Pathog. May 2012; 8 (5): e1002693. |
[6] | Hooi JKY, Lai WY, Ng WK, Suen MMY, Underwood FE, Tanyingoh D, et al. Global prevalence of Helicobacter pylori infection: systematic review and meta-analysis. Gastroenterology. Aug 2017; 153 (2): 420-9. |
[7] | Yang JC. Treatment of Helicobacter pylori infection: current status and future concepts. WJG. 2014; 20 (18): 5283. |
[8] | Born P, Breukink E, Vollmer W. In vitro synthesis of cross-linked murein and its attachment to sacculi by PBP1A from Escherichia coli. Journal of Biological Chemistry. Sept 2006; 281 (37): 26985-93. |
[9] | Attaran B, Salehi N, Ghadiri B, Esmaeili M, Kalateh S, Tashakoripour M, et al. The penicillin binding protein 1a of Helicobacter pylori, its amoxicillin binding site and access routes. Gut Pathog. Dec 2021; 13 (1): 43. |
[10] | Bille Bertrant E, Nguefak Lionel Danny T, Chimi Serge F, Agnes M, Mbassa Roger A, Jules Roger K, et al. Evolution of susceptibilities of Helicobacter pylori; strains circulating in Cameroon to usual antibiotics: A three-year study. IJG. 2020; 4 (2): 63. |
[11] | Thung I, Aramin H, Vavinskaya V, Gupta S, Park JY, Crowe SE, et al. Review article: the global emergence of Helicobacter pylori antibiotic resistance. Aliment Pharmacol Ther. Feb 2016; 43 (4): 514-33. |
[12] | World Health Organization (WHO). L’OMS publie une liste de bactéries contre lesquelles il est urgent d’avoir de nouveaux antibiotiques [Internet]. Geneva; © 2017 [cited 2022 Sep 13]. Available from https://www.who.int/fr/news/item/27-02-2017-who-publishes-list-of-bacteria-for-which-new-antibiotics-are-urgently-needed |
[13] | Vianna JS, Ramis IB, Ramos DF, Von Groll A, Silva PEA da. Drug resistance in Helicobacter pylori. Arq Gastroenterol. Dec 2016; 53 (4): 215-23. |
[14] | Tran TT, Nguyen AT, Quach DT, Pham DTH, Cao NM, Nguyen UTH, et al. Emergence of amoxicillin resistance and identification of novel mutations of the pbp1a gene in Helicobacter pylori in vietnam. BMC Microbiol. 2022; 22 (1): 41. |
[15] | Yachdav G, Wilzbach S, Rauscher B, Sheridan R, Sillitoe I, Procter J, et al. MSAViewer: interactive javascript visualization of multiple sequence alignments. Bioinformatics. July 2016; 32 (22): 3501-3. |
[16] | Kuo CJ, Ke JN, Kuo T, Lin CY, Hsieh SY, Chiu YF, et al. Multiple amino acid substitutions in penicillin-binding protein-1A confer amoxicillin resistance in refractory Helicobacter pylori infection. Journal of Microbiology, Immunology and Infection. Aug 2022; S1684118222001049. |
[17] | Matta AJ, Zambrano DC, Martínez YC, Fernández FF. Point mutations in the glycosyltransferase domain of the pbp1a gene in amoxicillin-resistant Helicobacter pylori isolates. Revista de Gastroenterología de México (English Edition). June 2022; S2255534X22000457. |
[18] | von Rechenberg M, Blake BK, Ho YSJ, Zhen Y, Chepanoske CL, Richardson BE, et al. Ampicillin/penicillin-binding protein interactions as a model drug-target system to optimize affinity pull-down and mass spectrometric strategies for target and pathway identification. Proteomics. May 2005; 5 (7): 1764-73. |
[19] | Jimah T, Fenny AP, Ogunseitan OA. Antibiotics stewardship in Ghana: a cross-sectional study of public knowledge, attitudes, and practices among communities. One Health Outlook. Dec 2020; 2 (1): 12. |
[20] | Obaseiki-Ebor EE, Akerele JO, Ebea PO. A survey of antibiotic outpatient prescribing and antibiotic self-medication. J Antimicrob Chemother. 1987; 20 (5): 759-63. |
[21] | Macheboeuf P, Contreras-Martel C, Job V, Dideberg O, Dessen A. Penicillin Binding Proteins: key players in bacterial cell cycle and drug resistance processes. FEMS Microbiol Rev. Sept 2006; 30 (5): 673-91. |
APA Style
David Guindo, Alpha Seydou Yaro, Astan Traore, Yaya Bouare, Bernard Sodio. (2022). Mutation in Transglycosylase Domain of Penicillin Binding Protein 1A (PBP1A) and Helicobacter pylori. American Journal of Biomedical and Life Sciences, 10(6), 155-161. https://doi.org/10.11648/j.ajbls.20221006.11
ACS Style
David Guindo; Alpha Seydou Yaro; Astan Traore; Yaya Bouare; Bernard Sodio. Mutation in Transglycosylase Domain of Penicillin Binding Protein 1A (PBP1A) and Helicobacter pylori. Am. J. Biomed. Life Sci. 2022, 10(6), 155-161. doi: 10.11648/j.ajbls.20221006.11
@article{10.11648/j.ajbls.20221006.11, author = {David Guindo and Alpha Seydou Yaro and Astan Traore and Yaya Bouare and Bernard Sodio}, title = {Mutation in Transglycosylase Domain of Penicillin Binding Protein 1A (PBP1A) and Helicobacter pylori}, journal = {American Journal of Biomedical and Life Sciences}, volume = {10}, number = {6}, pages = {155-161}, doi = {10.11648/j.ajbls.20221006.11}, url = {https://doi.org/10.11648/j.ajbls.20221006.11}, eprint = {https://article.sciencepublishinggroup.com/pdf/10.11648.j.ajbls.20221006.11}, abstract = {Helicobacter pylori (Hp) is associated in human gastric diseases. It touches more than 50% of the world's population. Clinically, amoxicillin is one of the antibiotics used to treat the pathogenic agent. It inhibits bacterial wall synthesis, by blocking the transpeptidase domain of penicillin binding protein 1A (PBP1A). Mutations in this domain are responsible for antimicrobial resistance (AMR). The transglycosylase domain is necessary to activate the transpeptidase. But its part in the resistance remains little documented. The objective of this study was to analyze the protein sequence of this domain in samples of Malian patients. Therefore, the PCR product was sequenced from five Hp positive samples. After alignment with the Helicobacter pylori 26695 sequence (reference), several amino acid substitutions were identified: T30N / F67S / I79V / I101V / F125L / I148L for sample 1 (PBP1A-ML1); G44S / I101V / F125L for PBP1A-ML2 and PBP1A-ML5 and A36V / F125L / I148L for PBP1A-ML3 and PBP1A-ML4. The last two groups of mutations were also observed in Hp PBP1A from other continents. Their existence shows the distribution of two or more Hp strains in Mali and worldwide. Although their direct implications for AMR have not been demonstrated, but their presence is supposed to modify the affinity of amoxicillin for its target. Considering the importance of transglycosylase in the activation of the transpeptidase domain, substitutions would allow Hp to adapt to a change in its environment. Additional research is needed to identify the role of observed substitutions.}, year = {2022} }
TY - JOUR T1 - Mutation in Transglycosylase Domain of Penicillin Binding Protein 1A (PBP1A) and Helicobacter pylori AU - David Guindo AU - Alpha Seydou Yaro AU - Astan Traore AU - Yaya Bouare AU - Bernard Sodio Y1 - 2022/11/04 PY - 2022 N1 - https://doi.org/10.11648/j.ajbls.20221006.11 DO - 10.11648/j.ajbls.20221006.11 T2 - American Journal of Biomedical and Life Sciences JF - American Journal of Biomedical and Life Sciences JO - American Journal of Biomedical and Life Sciences SP - 155 EP - 161 PB - Science Publishing Group SN - 2330-880X UR - https://doi.org/10.11648/j.ajbls.20221006.11 AB - Helicobacter pylori (Hp) is associated in human gastric diseases. It touches more than 50% of the world's population. Clinically, amoxicillin is one of the antibiotics used to treat the pathogenic agent. It inhibits bacterial wall synthesis, by blocking the transpeptidase domain of penicillin binding protein 1A (PBP1A). Mutations in this domain are responsible for antimicrobial resistance (AMR). The transglycosylase domain is necessary to activate the transpeptidase. But its part in the resistance remains little documented. The objective of this study was to analyze the protein sequence of this domain in samples of Malian patients. Therefore, the PCR product was sequenced from five Hp positive samples. After alignment with the Helicobacter pylori 26695 sequence (reference), several amino acid substitutions were identified: T30N / F67S / I79V / I101V / F125L / I148L for sample 1 (PBP1A-ML1); G44S / I101V / F125L for PBP1A-ML2 and PBP1A-ML5 and A36V / F125L / I148L for PBP1A-ML3 and PBP1A-ML4. The last two groups of mutations were also observed in Hp PBP1A from other continents. Their existence shows the distribution of two or more Hp strains in Mali and worldwide. Although their direct implications for AMR have not been demonstrated, but their presence is supposed to modify the affinity of amoxicillin for its target. Considering the importance of transglycosylase in the activation of the transpeptidase domain, substitutions would allow Hp to adapt to a change in its environment. Additional research is needed to identify the role of observed substitutions. VL - 10 IS - 6 ER -